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Publikace členů Laboratoře od r. 1995

Články v časopisech s IF

Dolejšová T., Sokol A., Bosák J., Šmajs D., Konopásek I., Mikušová G., Fišer R. (2019): Colicin U from Shigella boydii forms voltage-dependent pores. J. Bacteriol. doi:10.1128/JB.00493-19. [PubMed]

Lišková P., Konopásek I., Fišer R. (2019): Simple way to detect Trp to Tb3+ resonance energy transfer in calcium-binding peptides using excitation spectrum. J. Fluoresc. 29 (1): 9-14 [PubMed]

Micenková L., Bosák J., Kučera J., Hrala M., Dolejšová T., Šedo O., Linke D., Fišer R., Šmajs D. (2019): Colicin Z, a structurally and functionally novel colicin type that selectively kills enteroinvasive Escherichia coli and Shigella strains. Sci. Rep. 9: 11127. [PubMed]

Roderová J., Osičková A., Suková A., Mikušová G., Fišer R., Šebo P., Osička R, Mašín J. (2019): Residues 529 to 549 participate in membrane penetration and pore-forming activity of the Bordetella adenylate cyclase toxin. Sci. Rep. 9 (1): 5758 [PubMed]

Seydlová G., Sokol A., Lišková P., Konopásek I., Fišer R. (2019): Daptomycin pore formation and stoichiometry depend on membrane potential of target membrane. Antimicrob. Agents Chemother. 63 (1): e01589-18. [PubMed]

Budil J., Matyska Lišková P., Artemenko A., Ukraintsev E., Gordeev I., Beranová J., Konopásek I., Kromka A. (2018): Anti-adhesive properties of nanocrystalline diamond films against Escherichia coli bacterium: Influence of surface termination and cultivation medium. Diam. Relat. Mat.  83: 87-93. [Elsevier]

Lišková P., Beranová J., Ukraintsev E., Fišer R., Kofroňová O., Benada O., Konopásek I., Kromka A. (2018): Diamond nanoparticles suppress lateral growth of bacterial colonies, Colloid Surf. B-Biointerfaces 170: 544-552 [PubMed]

Pyrihová E., Motyčková A., Voleman L., Wandyszewska N., Fišer R., Seydlová G., Roger A., Kolísko M., Doležal P. (2018): A single Tim translocase in the mitosomes of Giardia intestinalis illustrates convergence of protein import machines in anaerobic eukaryotes. Genome Biol. Evol. 10 (10): 2813-2822. [PubMed]

Vaňousová K., Beranová J., Fišer R., Jemiola-Rzeminska M., Matyska Lišková P., Cybulski L., Strzalka K., Konopásek I. (2018): Membrane fluidization by alcohols inhibits DesK-DesR signalling in Bacillus subtilis. Biochim. Biophys. Acta - Biomembranes 1860 (3): 718-727. [PubMed]

Kylián O., Kratochvíl J., Petr M., Kuzminova A., Slavínská D., Biederman H., Beranová J. (2017): Ag/C:F Antibacterial and hydrophobic nanocomposite coatings. Funct. Matter. Lett. 10 (3): 1750029. [World Scientific]

Mašín J., Roderová J., Osičková A., Novák P., Bumba L., Fišer R., Šebo P., Osička R. (2017): The conserved tyrosine residue 940 plays a key structural role in membrane interaction of Bordetella adenylate cyclase toxin. Sci. Rep. 7 (1): 9330. [PubMed]

Seydlová G., Beranová J., Bibová I., Dienstbier A., Držmíšek J., Mašín J., Fišer R., Konopásek I., Večerek B. (2017): The extent of the temperature-induced membrane remodeling in two closely related Bordetella species reflects their adaptation to diverse environmental niches. J. Biol. Chem. 292 (19): 8048-8058. [PubMed]

Seydlová G., Pohl R., Zborníková E., Ehn M., Šimák O., Panova N., Kolář M., Bogdanová K., Večeřová R., Fišer R., Šanderová H., Vítovská D., Sudzinová P., Pospíšil J., Benada O., Křížek T., Sedlák D., Bartůněk P., Krásný L., Rejman D. (2017): Lipophosphonoxins II: Design, synthesis, and properties of novel broad spectrum antibacterial agents. J. Med. Chem. 60 (14): 6098-6118. [PubMed]

Vaidulych M., Hanuš J., Steinhartová T., Kylián O., Choukourov A., Beranová J., Khalakhan I., Biederman H. (2017): Deposition of Ag/a-C:H nanocomposite films with Ag surface enrichment. Plasma Process Polym. 14: e1600256 [Wiley Online Library]

Bierhanzl V.M., Čabala R., Ston M., Kotora P., Ferenczy V., Blaško J., Kubinec R., Seydlová G. (2016): Direct injection mass spectrometry, thin layer chromatography, and gas chromatography of Bacillus subtilis phospholipids. Monatsh. Chem. 147: 1385. [Springer Link]

Bierhanzl V.M., Bursová M., Ston M., Čabala R., Seydlová G. (2016): Simultaneous analysis of polar and non-polar components of cell membrane phospholipids by GC-MS, Chem. Papers 70 (10): 1309-1315. [DeGruyter]

Kromka A., Jíra J., Štenclová P., Křiha V., Kozak H., Beranová J., Vřetenář V., Skákalová V., Rezek B. (2016): Bacterial response to nanodiamonds and graphene oxide sheets. Phys. Stat. Solidii B. - Basic Solid State Phys. 253 (12): 2481-2485. [Wiley Online Library]

Kuzminová A., Beranová J., Polonskyi O., Shelemin A., Kylián O., Choukourov A., Slavínská D., Biederman H. (2016): Antibacterial nanocomposite coatings produced by means of gas aggregation source of silver nanoparticles. Surf. Coat. Technol. 294: 225-230. [Science Direct]

Mašín J., Osičková A., Suková A., Fišer R., Halada P., Bumba L., Linhartová I., Osička R., Šebo P. (2016): Negatively charged residues of the segment linking the enzyme and cytolysin moieties restrict the membrane-permeabilizing capacity of adenylate cyclase toxin. Sci. Rep. 6: 29137. [PubMed]

Matyska Lišková P., Fišer R., Macek P., Chmelík J., Sýkora J., Bednářová L., Konopásek I., Bumba L. (2016). Probing the Ca2+-assisted π–π interaction during Ca2+-dependent protein folding. Soft Matter 12 (2): 531-541. [PubMed]

Švédová M., Mašín J., Fišer R., Černý O., Tomala J., Freudenberg M., Tučková L., Kovář M., Dadaglio G., Adkins I., Šebo P. (2016). Pore-formation by adenylate cyclase toxoid activates dendritic cells to prime CD8+ and CD4+ T cells. Immunol. Cell Biol. 94 (4): 322-333.  [PubMed]

Toman O., Kabíčková T., Vít O., Fišer R., Machová-Poláková K, Zach J., Linhartová J., Vyoral D., Petrák J. (2016): Proteomic analysis of imatinib-resistant CML-T1 cells reveals calcium homeostasis as a potential therapeutic target. Oncol. Rep. 36 (3): 1258-1268. [PubMed]

Uttlová P., Pinkas D., Bechyňková O., Fišer R., Svobodová J., Seydlová G. (2016): Bacillus subtilis alters the proportion of major membrane phospholipids in response to surfactin exposure. Biochim. Biophys. Acta - Biomembranes 1858 (12): 2965-2971. [ScienceDirect]

Wald T., Osičková A., Mašín J., Matyska Lišková P., Petry-Podgorska I., Matoušek T., Šebo P., Osička R. (2016): Transmembrane segments of complement receptor 3 do not participate in cytotoxic activities but determine receptor structure required for action of Bordetella adenylate cyclase toxin. Pathogens Dis. 74 (3): ftw008. [PubMed]

Bierhanzl V. M., Riesová M., Taraba L., Čabala R., Seydlová G. (2015): Analysis of phosphate and phosphate containing headgroups enzymatically cleaved from phospholipids of Bacillus subtilis by capillary electrophoresis. Anal. Bioanal. Chem. 407 (23): 7215-7220. [PubMed]

Koukalová A., Pokorná Š., Fišer R., Kopecká V., Jr., Humpolíčková J., Černý J., Hof M. (2015): Membrane activity of the pentaene macrolide didehydroroflamycoin in model lipid bilayers. Biochim. Biophys. Acta - Biomembranes 1848 (2): 444-452. [PubMed]

Lišková J., Douglas T.E.L., Beranová J., Skwarczynska A., Božič M., Samal S.K., Modrzejewska Z., Gorgieva S., Kokol V., Bačáková L. (2015): Chitosan hydrogels enriched with polyphenols: Antibacterial activity, cell adhesion and growth and mineralization. Carbohydr. Polymers 129: 135-142. [PubMed]

Panova M., Zborníková E., Šimák O., Pohl R., Kolář M., Bogdanová K., Večeřová R., Seydlová G., Fišer R., Hadravová R., Šanderová H., Vítovská D., Šiková M., Látal T., Lovecká P., Barvík I., Krásný L., Rejman D. (2015): Insights into the mechanism of action of bactericidal lipophosphonoxins. PLoS ONE 10 (12): e0145918. [PubMed]

Švédová M., Mašín J., Fišer R., Černý O., Tomala J., Freudenberg M., Tučková L., Kovář M., Dadaglio G., Adkins I., Šebo P. (2015). Pore-formation by adenylate cyclase toxoid activates dendritic cells to prime CD8+ and CD4+ T cells. Immunol. Cell Biol. 94 (4): 322-333.  [PubMed]

Tomek P., Hrouzek P., Kuzma M., Sýkora J., Fišer R., Černý J., Novák P., Bártová S., Šimek P., Hof M., Kavan D., Kopecký J. (2015): Cytotoxic lipopeptide Muscotoxin A, isolated from soil cyanobacterium Desmonostoc muscorum, permeabilizes phospholipid membranes by reducing their fluidity. Chem. Res. Toxicol. 28(2): 216–224. [PubMed]

Beranová J., Seydlová G., Kozak H., Benada O., Fišer R., Artemenko A., Konopásek I., Kromka A. (2014): Sensitivity of bacteria to diamond nanoparticles of various size differs in gram-positive and gram-negative cells. FEMS Microbiol. Lett. 351 (2): 179-186. [PubMed]

Matoušková J., Janda M., Fišer R., Šašek V., Kocourková D., Burketová L., Dušková J., Martinec J., Valentová O. (2014): Changes in actin dynamics are involved in salicylic acid signaling pathway. Plant Sci. 223: 36-44. [PubMed]

Wald T., Petry-Podgorska I., Fišer R., Matoušek T., Dědina J., Osička R., Šebo P., Mašín J. (2014): Quantification of potassium levels in cells treated with Bordetella adenylate cyclase toxin. Anal. Biochem. 450: 57-62. [PubMed]

Seydlová G., Fišer R., Čabala R., Kozlík P., Svobodová J., Pátek M. (2013): Surfactin production enhances the level of cardiolipin in the cytoplasmic membrane of Bacillus subtilis. Biochem. Biophys. Acta - Biomembranes 1828 (11): 2370-2378. [PubMed]

Beranová J., Seydlová G., Kozak H., Potocký Š., Konopásek I., Kromka A. (2012): Antibacterial behavior of diamond nanoparticles against Escherichia coli. Phys. Status Solidi B. 249 (12): 2581–2584. [Wiley Online Library]

Fišer R., Mašín J., Bumba L., Pospíšilová E., Fayolle C., Basler M., Sadílková L., Adkins I., Kamanová J., Černý J., Konopásek I., Osička R., Leclerc C., Šebo P. (2012): Calcium influx rescues adenylate cyclase-hemolysin from rapid cell membrane removal and enables phagocyte permeabilization by toxin pores. PLoS Pathog. 8 (4): e1002580. [PubMed]

Hrouzek P., Kuzma M., Černý J., Novák P., Fišer R., Šimek P., Lukešová A., Kopecký J. (2012): The cyanobacterial cyclic lipopeptides puwainaphycins F/G are inducing necrosis via cell membrane permeabilization and subsequent unusual actin relocalization. Chem. Res. Toxicol. 25 (6): 1203-1211. [PubMed]

Krtková J., Havelková L., Křepelová A., Fišer R., Vosolsobě S., Novotná Z., Martinec J., Schwarzerová K. (2012): Loss of membrane fluidity and endocytosis inhibition are involved in rapid aluminum-induced root growth cessation in Arabidopsis thaliana. Plant Physiol. Biochem. 60: 88-97. [PubMed]

Seydlová G., Halada P., Fišer R., Toman O., Ulrych A., Svobodová J. (2012): DnaK and GroEL chaperones are recruited to the Bacillus subtilis membrane after short-term ethanol stress. J. Appl. Microbiol. 112 (4): 765-774 [PubMed]

Seydlová G., Svobodová J. (2012): Rapid and effective method for the separation of Bacillus subtilis vegetative cells and spores. Folia Microbiol. 57(5): 455-457. [PubMed]

Beranová J., Mansilla M.C., de Mendoza D., Elhottová D., Konopásek I. (2010): Differences of cold adaptation of Bacillus subtilis under anaerobic and aerobic conditions. J. Bacteriol. 192 (16): 4164-4171. [PubMed]

Bumba L., Mašín J., Fišer R., Šebo P. (2010): Bordetella adenylate cyclase toxin mobilizes its β2 integrin receptor into lipid rafts to accomplish translocation across target cell membrane in two steps. PLoS Pathog. 6 (5): e1000901. [PubMed]

Petráčková D., Šemberová L., Halada P., Svoboda P., Svobodová J. (2010): Stress proteins in the cytoplasmic membrane fraction of Bacillus subtilis. Folia Microbiol. 55 (5): 427-434. [SpringerLink]

Petráčková D., Večer J., Svobodová J., Herman P. (2010): Long-term adaptation of Bacillus subtilis 168 to extreme pH affects chemical and physical properties of the cellular membrane. J. Membr. Biol. 233 (1-3): 73-83. [PubMed]

Fišer R., Konopásek I. (2009): Different modes of membrane permeabilization by two toxins: HlyA from Escherichia coli and CyaA from Bordetella pertussis. Biochim. Biophys. Acta - Biomembranes 1788 (6): 1249-1254. [PubMed]

Beranová J., Jemiola-Rzeminska M., Elhottova D., Strzalka K., Konopásek I. (2008): Metabolic control of the membrane fluidity in Bacillus subtilis during cold adaptation. Biochim. Biophys. Acta - Biomembranes 1778 (2): 445-453. [PubMed]

Seydlová G., Svobodová J. (2008): Development of membrane lipids in the surfactin producer Bacillus subtilis. Folia Microbiol. 53 (4): 303-307. [SpringerLink]

Seydlová G., Svobodová J. (2008): Review of the surfactin chemical properties and the potential biomedical applications. Centr. Eur. J. Med. 3 (2): 123-133. [SpringerLink]

Basler M., Knapp O., Mašín J., Fišer R., Maier E., Benz R., Šebo P., Osička R. (2007): Segments crucial for membrane translocation and pore-forming activity of Bordetella adenylate cyclase toxin. J. Biol. Chem. 282 (17): 12419-12429. [PubMed]

Fišer R., Mašín J., Basler M., Krušek J., Špuláková V., Konopásek I., Šebo P. (2007): Third activity of Bordetella adenylate cyclase (AC) toxin-hemolysin - Membrane translocation of AC domain polypeptide promotes calcium influx into CD11b(+) monocytes independently of the catalytic and hemolytic activities. J. Biol. Chem. 282 (5): 2808-2820. [PubMed]

Toman O., Le Hégarat F., Svobodová J. (2007): Detection of lateral heterogeneity in the cytoplasmic membrane of Bacillus subtilis. Folia Microbiol. 52 (4): 339-345. [SpringerLink]

Mašín J., Basler M., Knapp O., El-Azami-El-Idrissi M., Maier E., Konopásek I., Benz R., Leclerc C., Šebo P. (2005): Acylation of lysine 860 allows tight binding and cytotoxicity of Bordetella adenylate cyclase on CD11b-expressing cells. Biochemistry 44 (38): 12759-12766. [PubMed]

Konopásek I., Večeř J., Strzalka K., Amler E. (2004): Short-lived fluorescence component of DPH reports on lipid-water interface of biological membranes. Chem. Phys. Lipids 130 (2): 135-144. [PubMed]

Martín C., Requero M.A., Mašín J., Konopásek I., Goni F.M., Šebo P., Ostolaza H. (2004): Membrane restructuring by Bordetella pertussis adenylate cyclase toxin, a member of the RTX toxin family. J. Bacteriol. 176 (12): 3760-3765. [PubMed]

Mašín J., Konopásek I., Svobodová J., Šebo P. (2004): Different structural requirements for adenylate cyclase toxin interactions with erythrocyte and liposome membranes. Biochim. Biophys. Acta-Biomembranes 1660 (1-2): 144-154. [PubMed]

Saint-Pierre-Chazalet M., Plášek J., Konopásek I. (2002): A monolayer study of properties of isolated membrane phospholipids of Bacillus subtillis. Colloid Surface B. 23 (1): 43-49. [ScienceDirect]

Šebestián J., Petrmichlová Z., Šebestiánová Š., Náprstek J., Svobodová J. (2001): Osmoregulation in Bacillus subtilis under potassium limitation: a new inducible K+-stimulated, VO4 3- - inhibited ATPase. Can. J. Microbiol. 47 (12): 1116-1125. [PubMed]

Konopásek I., Strzalka K., Svobodová J. (2000): Cold shock in Bacillus subtilis: different effect of benzyl alcohol and ethanol on the membrane organization and cell adaptation. Biochim. Biophys. Acta 1464 (1): 18-26. [PubMed]

Smýkal P., Mašín J., Hrdý I., Konopásek I., Žárský V. (2000): Chaperone activity of tobacco HSP18, a small heat-shock protein, is inhibited by ATP. Plant J. 23 (6): 703-713. [PubMed]

Konopásek I., Kvasnička P., Heřman P., Linnertz H., Obšil T., Večeř J., Svobodová J., Strzalka K., Mazzanti L., Amler E. (1998): The origin of the diphenylhexatriene short lifetime component in membranes and solvents. Chem. Phys. Lett. 293 (5-6): 429-435. [ScienceDirect]

Opekarová M., Urbanová P., Konopásek I., Kvasnička P., Strzalka K., Sigler K., Amler E. (1996): Possible nystatin-protein interaction in yeast plasma membrane vesicles in the presence of ergosterol. A Forster energy transfer study. FEBS Lett. 386 (2-3): 181-184. [PubMed]

Konopásek I., Kvasnička P., Amler E., Kotyk A., Curatola G. (1995): The transmembrane gradient of the dielectric-constant influences the DPH lifetime distribution. FEBS Lett. 374 (3): 338-340. [PubMed]

Kunclová D., Liška V., Svoboda P., Svobodová J. (1995): Cold-shock response of protein, RNA, DNA and phospholipid synthesis in Bacillus subtilis. Folia Microbiol. 40 (6): 627-632. [SpringerLink]

Svobodová J., Konopásek I., Kaprálek F., Svoboda P. (1995): Effect of benzyl alcohol and ethanol on cold-shock response of Bacillus subtilis. Folia Microbiol. 40 (6): 633-638. [SpringerLink]

 

 

Knihy, kapitoly v knihách a recenzovaných sbornících, učební texty

Bierhanzl V.M., Riesová M., Seydlová G., Čabala R. (2017): CE analysis of phospholipid headgroups. In: Wood P. (ed.): Lipidomics. Humana Press, Springer Science+Business Media LLC, pp. 159-161. [Springer]

Panova N., Zborníková E., Šimák O., Krásný L., Kolář M., Látal T., Seydlová G., Rejman D. (2014). Insights into the mechanism of action of bactericidal lipophosphonoxins. Collection Symposium Series 14: 115-118. [pdf]

Seydlová G., Čabala R., Svobodová J. (2011): Surfactin: novel solutions for global issues. In: Komorowska M.A., Olsztynska-Janus S. (eds): Biochemical Engineering, Trends, Research and Technologies. InTech, Rijeka, pp. 305-330. [InTech]

Bednář M., Konopásek I. (2001): Metodika hodnocení rizika pro geneticky modifikované mikroorganismy. In: Římanová D., Doubková Z. (eds): Zákon o nakládání s geneticky modifikovanými organismy a produkty a o změně některých dalších zákonů včetně prováděcích předpisů s komentářem, Polygon, Praha, pp. 205-254.

Mašín J., Konopásek I., Kalhous M., Svobodová J., Šebo P. (1999): Interaction of Bordetella pertussis adenylate cyclase toxin with artificial lipid membranes: Kinetics of toxin-mediated lysis of multilamellar liposomes. In: Kotyk A. (ed.): Microscopy and Fluorescence Probes 3. Espero Publishing, Ústí n. Labem, pp. 251-257.

Heřman P., Konopásek I., Večeř J., Svobodová J. (1998): Time-resolved fluorescence and thermal adaptation of Bacillus subtilis: The role of membrane proteins. In: Slavík J. (ed.): Fluorescence microscopy and fluorescence probes 2. Plenum Press Publishing Corporation, New York, pp. 25-29. [GoogleBooks]

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